MolNFT v1 · #332537 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B0KU95)
B0KU95: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B0KU95)”. 9 pockets (best druggability 0.82). MolNFT v1 #332537 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B0KU95
- Type
- protein
- Length
- 948 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB00e4078924fAA25591B0a231c32CcF455f85C70
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- B0KU95
- Pockets
- 9 · best druggability 0.82
Structure
1 distinct chain · 46% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 948 | 46% helix, 18% strand | B0KU95 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1177 | 0.82 | 0.83 | 110 | empty |
| 2 | 696 | 0.82 | 0.86 | 98 | empty |
| 3 | 181 | 0.67 | 0.86 | 35 | empty |
| 4 | 222 | 0.57 | 0.79 | 24 | empty |
| 5 | 167 | 0.52 | 0.78 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0KU95
- Elsewhere: UniProt B0KU95 · AlphaFold DB B0KU95
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