MolNFT v1 · #332528 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B4F2H6)
B4F2H6: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B4F2H6)”. 8 pockets (best druggability 0.81). MolNFT v1 #332528 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B4F2H6
- Type
- protein
- Length
- 967 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- B4F2H6
- Pockets
- 8 · best druggability 0.81
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 967 | 47% helix, 18% strand | B4F2H6 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 740 | 0.81 | 0.85 | 80 | empty |
| 2 | 818 | 0.80 | 0.83 | 71 | empty |
| 3 | 520 | 0.67 | 0.78 | 58 | empty |
| 4 | 214 | 0.52 | 0.77 | 24 | empty |
| 5 | 211 | 0.46 | 0.74 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4F2H6
- Elsewhere: UniProt B4F2H6 · AlphaFold DB B4F2H6
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