MolNFT v1 · #332517 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A5UAT0)
A5UAT0: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A5UAT0)”. 15 pockets (best druggability 0.77). MolNFT v1 #332517 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A5UAT0
- Type
- protein
- Length
- 923 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4312c32c7eA2564E3D5896f13870F2A4F29Ec1f2
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A5UAT0
- Pockets
- 15 · best druggability 0.77
Structure
1 distinct chain · 45% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 923 | 45% helix, 19% strand | A5UAT0 |
Pockets
15 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 617 | 0.77 | 0.83 | 51 | empty |
| 2 | 860 | 0.72 | 0.77 | 98 | empty |
| 3 | 50 | 0.68 | 0.97 | 14 | empty |
| 4 | 208 | 0.62 | 0.83 | 30 | empty |
| 5 | 311 | 0.58 | 0.77 | 45 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5UAT0
- Elsewhere: UniProt A5UAT0 · AlphaFold DB A5UAT0
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