MolNFT v1 · #332514 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B7LVT0)
B7LVT0: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B7LVT0)”. 9 pockets (best druggability 0.81). MolNFT v1 #332514 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B7LVT0
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- B7LVT0
- Pockets
- 9 · best druggability 0.81
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | B7LVT0 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1057 | 0.81 | 0.82 | 105 | empty |
| 2 | 1156 | 0.77 | 0.79 | 98 | empty |
| 3 | 50 | 0.64 | 0.94 | 16 | empty |
| 4 | 291 | 0.59 | 0.78 | 48 | empty |
| 5 | 110 | 0.47 | 0.80 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7LVT0
- Elsewhere: UniProt B7LVT0 · AlphaFold DB B7LVT0
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