MolNFT v1 · #332501 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (C4ZPY3)
C4ZPY3: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (C4ZPY3)”. 9 pockets (best druggability 0.81). MolNFT v1 #332501 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- C4ZPY3
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- C4ZPY3
- Pockets
- 9 · best druggability 0.81
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | C4ZPY3 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1047 | 0.81 | 0.82 | 98 | empty |
| 2 | 1008 | 0.79 | 0.81 | 109 | empty |
| 3 | 166 | 0.52 | 0.79 | 30 | empty |
| 4 | 135 | 0.49 | 0.79 | 20 | empty |
| 5 | 85 | 0.38 | 0.77 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4ZPY3
- Elsewhere: UniProt C4ZPY3 · AlphaFold DB C4ZPY3
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