MolNFT v1 · #319669 · protein
AlphaFold monomer V2.0 prediction for pts system mannose-specific eiiab component (P69797)
P69797: “AlphaFold monomer V2.0 prediction for pts system mannose-specific eiiab component (P69797)”. 3 pockets (best druggability 0.54). MolNFT v1 #319669 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P69797
- Type
- protein
- Length
- 323 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Pts system mannose-specific eiiab component
- UniProt
- P69797
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pts system mannose-specific eiiab component | protein | 323 | 39% helix, 21% strand | P69797 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 260 | 0.54 | 0.76 | 33 | empty |
| 2 | 227 | 0.52 | 0.76 | 26 | empty |
| 3 | 75 | 0.30 | 0.74 | 16 | empty |
Compared structures
- 2JZH · Structure of iib domain of the mannose transporter of E. COLI · an experimental structure of the same protein · chain A against A, TM-score 0.50
- 2JZH · structure of IIB domain of the mannose transporter of E. coli · an experimental structure of the same protein · chain A against A, TM-score 0.50
- 2JZO · Solution NMR structure of the non-productive complex between iiamannose and iibmannose of… · an experimental structure of the same protein · chain A against D, TM-score 0.50
- 2JZO · Solution NMR structure of the non-productive complex between IIAMannose and IIBMannose of… · an experimental structure of the same protein · chain A against D, TM-score 0.50
- 1VSQ · Solution NMR structure of the productive complex between iiamannose and iibmannose of the… · an experimental structure of the same protein · chain A against C, TM-score 0.50
- 2JZN · Solution NMR structure of the productive complex between iiamannose and iibmannose of the… · an experimental structure of the same protein · chain A against C, TM-score 0.50
- 1VSQ · Solution NMR structure of the productive complex between IIAMannose and IIBMannose of the… · an experimental structure of the same protein · chain A against C, TM-score 0.50
- 2JZN · Solution NMR structure of the productive complex between IIAMannose and IIBMannose of the… · an experimental structure of the same protein · chain A against C, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69797
- Elsewhere: UniProt P69797 · AlphaFold DB P69797
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