MolNFT v1 · #318306 · protein
AlphaFold monomer V2.0 prediction for protochlorophyllide-dependent translocon component 52, chloroplastic (Q8W496)
Q8W496: “AlphaFold monomer V2.0 prediction for protochlorophyllide-dependent translocon component 52, chloroplastic…”. 9 pockets (best druggability 0.81). MolNFT v1 #318306 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8W496
- Type
- protein
- Length
- 559 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Protochlorophyllide-dependent translocon component 52, chloroplastic
- UniProt
- Q8W496
- Pockets
- 9 · best druggability 0.81
Structure
1 distinct chain · 32% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protochlorophyllide-dependent translocon component 52, chloroplastic | protein | 559 | 32% helix, 19% strand | Q8W496 |
Pockets
9 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 503 | 0.81 | 0.87 | 48 | empty |
| 2 | 139 | 0.76 | 0.94 | 25 | empty |
| 3 | 464 | 0.65 | 0.77 | 37 | empty |
| 4 | 248 | 0.62 | 0.81 | 33 | empty |
| 5 | 204 | 0.53 | 0.77 | 24 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8W496
- Elsewhere: UniProt Q8W496 · AlphaFold DB Q8W496
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.