MolNFT v1 · #318209 · protein
AlphaFold monomer V2.0 prediction for platelet-activating factor receptor (Q9XSD4)
Q9XSD4: “AlphaFold monomer V2.0 prediction for platelet-activating factor receptor (Q9XSD4)”. 3 pockets (best druggability 0.78). MolNFT v1 #318209 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9XSD4
- Type
- protein
- Length
- 342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8a7b1782CE62A880494cB63CE2416dfA7aC6391d
- Molecule
- Platelet-activating factor receptor
- UniProt
- Q9XSD4
- Pockets
- 3 · best druggability 0.78
Structure
1 distinct chain · 75% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Platelet-activating factor receptor | protein | 342 | 75% helix, 3% strand | Q9XSD4 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 241 | 0.78 | 0.91 | 38 | empty |
| 2 | 278 | 0.56 | 0.76 | 33 | empty |
| 3 | 85 | 0.35 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XSD4
- Elsewhere: UniProt Q9XSD4 · AlphaFold DB Q9XSD4
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