MolNFT v1 · #318067 · protein
AlphaFold monomer V2.0 prediction for phytoene synthase 1, chloroplastic (Q5Z5B7)
Q5Z5B7: “AlphaFold monomer V2.0 prediction for phytoene synthase 1, chloroplastic (Q5Z5B7)”. 6 pockets (best druggability 0.83). MolNFT v1 #318067 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5Z5B7
- Type
- protein
- Length
- 420 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9a3d3E3c804559Ff57D6bdF22acA278B4f92e6F7
- Molecule
- Phytoene synthase 1, chloroplastic
- UniProt
- Q5Z5B7
- Pockets
- 6 · best druggability 0.83
Structure
1 distinct chain · 58% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phytoene synthase 1, chloroplastic | protein | 420 | 58% helix, 2% strand | Q5Z5B7 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 661 | 0.83 | 0.88 | 62 | empty |
| 2 | 225 | 0.54 | 0.77 | 29 | empty |
| 3 | 204 | 0.51 | 0.77 | 33 | empty |
| 4 | 124 | 0.38 | 0.74 | 22 | empty |
| 5 | 96 | 0.36 | 0.74 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5Z5B7
- Elsewhere: UniProt Q5Z5B7 · AlphaFold DB Q5Z5B7
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