MolNFT v1 · #318053 · protein
AlphaFold monomer V2.0 prediction for pseudouridine-5'-phosphate glycosidase (Q8NYD0)
Q8NYD0: “AlphaFold monomer V2.0 prediction for pseudouridine-5'-phosphate glycosidase (Q8NYD0)”. 4 pockets (best druggability 0.74). MolNFT v1 #318053 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8NYD0
- Type
- protein
- Length
- 307 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEFBFDD7c5CFB5252F9d95cDFb437Cf72c1e15430
- Molecule
- Pseudouridine-5'-phosphate glycosidase
- UniProt
- Q8NYD0
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 48% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pseudouridine-5'-phosphate glycosidase | protein | 307 | 48% helix, 17% strand | Q8NYD0 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 261 | 0.74 | 0.88 | 42 | empty |
| 2 | 85 | 0.48 | 0.82 | 15 | empty |
| 3 | 64 | 0.38 | 0.79 | 15 | empty |
| 4 | 54 | 0.36 | 0.79 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NYD0
- Elsewhere: UniProt Q8NYD0 · AlphaFold DB Q8NYD0
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