MolNFT v1 · #317950 · protein
AlphaFold monomer V2.0 prediction for L-seryl-TRNA(SEC) kinase (Q58933)
Q58933: “AlphaFold monomer V2.0 prediction for L-seryl-TRNA(SEC) kinase (Q58933)”. 3 pockets (best druggability 0.57). MolNFT v1 #317950 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q58933
- Type
- protein
- Length
- 248 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- L-seryl-TRNA(SEC) kinase
- UniProt
- Q58933
- Pockets
- 3 · best druggability 0.57
Structure
1 distinct chain · 60% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | L-seryl-TRNA(SEC) kinase | protein | 248 | 60% helix, 10% strand | Q58933 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 330 | 0.57 | 0.76 | 32 | empty |
| 2 | 111 | 0.42 | 0.77 | 18 | empty |
| 3 | 54 | 0.35 | 0.79 | 12 | empty |
Compared structures
- 3ADB · Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 3ADB · Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 3ADD · Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 3ADD · Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 3ADC · Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and… · an experimental structure of the same protein · chain A against B, TM-score 0.75
- 3ADC · Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and… · an experimental structure of the same protein · chain A against B, TM-score 0.75
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q58933
- Elsewhere: UniProt Q58933 · AlphaFold DB Q58933
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.