MolNFT v1 · #316953 · protein
AlphaFold monomer V2.0 prediction for psilocybin synthase (P0DPA9)
P0DPA9: “AlphaFold monomer V2.0 prediction for psilocybin synthase (P0DPA9)”. 2 pockets (best druggability 0.78). MolNFT v1 #316953 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0DPA9
- Type
- protein
- Length
- 309 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7b8e62e0dcf0Bf4048333668837dF89841F58c0C
- Molecule
- Psilocybin synthase
- UniProt
- P0DPA9
- Pockets
- 2 · best druggability 0.78
Structure
1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Psilocybin synthase | protein | 309 | 43% helix, 18% strand | P0DPA9 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 695 | 0.78 | 0.83 | 80 | empty |
| 2 | 53 | 0.26 | 0.73 | 16 | empty |
Compared structures
- 8QXQ · PsiM in complex with SAH and psilocybin · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 8PB5 · PsiM in complex with sinefungin and norbaeocystin · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 8PB7 · PsiM in complex with sinefungin and baeocystin · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 8PB6 · PsiM in complex with SAH and baeocystin · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 8PB4 · PsiM in complex with SAH and norbaeocystin, orthorhombic crystal form · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 9FMI · PsiM N247A in complex with SAH and norbaeocystin · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 9FMH · PsiM N247M in complex with SAH and norbaeocystin · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 9FMJ · PsiM N247M in complex with sinefungin and baeocystin · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 9FMK · PsiM N247A in complex with sinefungin and baeocystin · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 8PB3 · PsiM in complex with SAH and norbaeocystin, monoclinic crystal form · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 9GR7 · PsiM in complex with sinefungin · an experimental structure of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DPA9
- Elsewhere: UniProt P0DPA9 · AlphaFold DB P0DPA9
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