MolNFT v1 · #314041 · protein
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (B2LMI8)
B2LMI8: “AlphaFold monomer V2.0 prediction for photosystem II D2 protein (B2LMI8)”. 4 pockets (best druggability 0.59). MolNFT v1 #314041 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B2LMI8
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Photosystem II D2 protein
- UniProt
- B2LMI8
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 353 | 63% helix, 2% strand | B2LMI8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.59 | 0.86 | 18 | empty |
| 2 | 103 | 0.47 | 0.80 | 20 | empty |
| 3 | 169 | 0.46 | 0.75 | 22 | empty |
| 4 | 124 | 0.38 | 0.73 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2LMI8
- Elsewhere: UniProt B2LMI8 · AlphaFold DB B2LMI8
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