MolNFT v1 · #313998 · protein
AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q8S8X8)
Q8S8X8: “AlphaFold monomer V2.0 prediction for photosystem II D2 protein (Q8S8X8)”. 4 pockets (best druggability 0.62). MolNFT v1 #313998 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8S8X8
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfCF8030D6dCe69CD3f00b65DF7234e9bE5CcBB08
- Molecule
- Photosystem II D2 protein
- UniProt
- Q8S8X8
- Pockets
- 4 · best druggability 0.62
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II D2 protein | protein | 353 | 63% helix, 2% strand | Q8S8X8 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.62 | 0.87 | 18 | empty |
| 2 | 313 | 0.55 | 0.74 | 40 | empty |
| 3 | 106 | 0.48 | 0.80 | 21 | empty |
| 4 | 66 | 0.31 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8S8X8
- Elsewhere: UniProt Q8S8X8 · AlphaFold DB Q8S8X8
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