MolNFT v1 · #313716 · protein
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (P69556)
P69556: “AlphaFold monomer V2.0 prediction for photosystem II protein D1 (P69556)”. 4 pockets (best druggability 0.64). MolNFT v1 #313716 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P69556
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80B89eAC204820Bfe8A7E83C5Cb1Ee4233C1B22C
- Molecule
- Photosystem II protein D1
- UniProt
- P69556
- Pockets
- 4 · best druggability 0.64
Structure
1 distinct chain · 59% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 353 | 59% helix, 3% strand | P69556 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 101 | 0.64 | 0.89 | 20 | empty |
| 2 | 455 | 0.64 | 0.77 | 59 | empty |
| 3 | 160 | 0.45 | 0.74 | 22 | empty |
| 4 | 58 | 0.31 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69556
- Elsewhere: UniProt P69556 · AlphaFold DB P69556
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