MolNFT v1 · #313609 · protein
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q6B929)
Q6B929: “AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q6B929)”. 4 pockets (best druggability 0.71). MolNFT v1 #313609 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q6B929
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x02341c70C616cfDFAF546e41Ec04921b9fEa2575
- Molecule
- Photosystem II protein D1
- UniProt
- Q6B929
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 360 | 58% helix, 3% strand | Q6B929 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 511 | 0.71 | 0.81 | 54 | empty |
| 2 | 83 | 0.63 | 0.90 | 18 | empty |
| 3 | 183 | 0.46 | 0.74 | 23 | empty |
| 4 | 50 | 0.29 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6B929
- Elsewhere: UniProt Q6B929 · AlphaFold DB Q6B929
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