MolNFT v1 · #313580 · protein
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q09MJ8)
Q09MJ8: “AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q09MJ8)”. 3 pockets (best druggability 0.64). MolNFT v1 #313580 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q09MJ8
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Photosystem II protein D1
- UniProt
- Q09MJ8
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 59% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 353 | 59% helix, 3% strand | Q09MJ8 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 440 | 0.64 | 0.78 | 57 | empty |
| 2 | 94 | 0.63 | 0.88 | 20 | empty |
| 3 | 154 | 0.44 | 0.74 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q09MJ8
- Elsewhere: UniProt Q09MJ8 · AlphaFold DB Q09MJ8
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