MolNFT v1 · #313549 · protein
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (A4QJI0)
A4QJI0: “AlphaFold monomer V2.0 prediction for photosystem II protein D1 (A4QJI0)”. 4 pockets (best druggability 0.66). MolNFT v1 #313549 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A4QJI0
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1b688835E9E5f9541064C112c92C1Ce15E0cbC3a
- Molecule
- Photosystem II protein D1
- UniProt
- A4QJI0
- Pockets
- 4 · best druggability 0.66
Structure
1 distinct chain · 59% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 353 | 59% helix, 3% strand | A4QJI0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 477 | 0.66 | 0.78 | 63 | empty |
| 2 | 97 | 0.63 | 0.88 | 18 | empty |
| 3 | 171 | 0.45 | 0.74 | 22 | empty |
| 4 | 58 | 0.31 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QJI0
- Elsewhere: UniProt A4QJI0 · AlphaFold DB A4QJI0
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