MolNFT v1 · #313521 · protein
AlphaFold monomer V2.0 prediction for photosystem II protein D1 2 (P04997)
P04997: “AlphaFold monomer V2.0 prediction for photosystem II protein D1 2 (P04997)”. 4 pockets (best druggability 0.69). MolNFT v1 #313521 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P04997
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Photosystem II protein D1 2
- UniProt
- P04997
- Pockets
- 4 · best druggability 0.69
Structure
1 distinct chain · 55% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 2 | protein | 360 | 55% helix, 3% strand | P04997 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 535 | 0.69 | 0.79 | 54 | empty |
| 2 | 83 | 0.66 | 0.91 | 17 | empty |
| 3 | 175 | 0.46 | 0.74 | 25 | empty |
| 4 | 56 | 0.33 | 0.78 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04997
- Elsewhere: UniProt P04997 · AlphaFold DB P04997
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