MolNFT v1 · #313511 · protein
AlphaFold monomer V2.0 prediction for photosystem II protein D1 1 (Q3AYB8)
Q3AYB8: “AlphaFold monomer V2.0 prediction for photosystem II protein D1 1 (Q3AYB8)”. 3 pockets (best druggability 0.68). MolNFT v1 #313511 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q3AYB8
- Type
- protein
- Length
- 358 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7C5991B66CA84425AC947F3bE4428892A9f521dc
- Molecule
- Photosystem II protein D1 1
- UniProt
- Q3AYB8
- Pockets
- 3 · best druggability 0.68
Structure
1 distinct chain · 56% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 1 | protein | 358 | 56% helix, 3% strand | Q3AYB8 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 593 | 0.68 | 0.78 | 77 | empty |
| 2 | 78 | 0.65 | 0.91 | 19 | empty |
| 3 | 169 | 0.45 | 0.75 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3AYB8
- Elsewhere: UniProt Q3AYB8 · AlphaFold DB Q3AYB8
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