MolNFT v1 · #312214 · protein
AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (P12154)
P12154: “AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (P12154)”. 10 pockets (best druggability 0.70). MolNFT v1 #312214 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P12154
- Type
- protein
- Length
- 751 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x53Aa88882ff065A295496096E64bfd464CC50A6B
- Molecule
- Photosystem I P700 chlorophyll a apoprotein A1
- UniProt
- P12154
- Pockets
- 10 · best druggability 0.70
Structure
1 distinct chain · 61% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem I P700 chlorophyll a apoprotein A1 | protein | 751 | 61% helix, 5% strand | P12154 |
Pockets
10 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 615 | 0.70 | 0.77 | 63 | empty |
| 2 | 764 | 0.69 | 0.75 | 69 | empty |
| 3 | 394 | 0.58 | 0.75 | 41 | empty |
| 4 | 292 | 0.57 | 0.76 | 41 | empty |
| 5 | 268 | 0.57 | 0.76 | 27 | empty |
Compared structures
- 7ZQC · Monomeric PSI of Chlamydomonas reinhardtii at 2.31 A resolution · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7ZQ9 · Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded) · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7ZQD · Dimeric PSI of Chlamydomonas reinhardtii at 2.97 A resolution · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7O01 · Dimeric photosystem I of a temperature sensitive mutant chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 7O01 · Dimeric Photosystem I of a temperature sensitive mutant Chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 7BGI · Photosystem I of a temperature sensitive mutant Chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 7BGI · Photosystem I of a temperature sensitive mutant chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 7BLX · Photosystem I of a temperature sensitive mutant chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 7R3K · Chlamydomonas reinhardtii TSP9 mutant small Photosystem I complex · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 7DZ7 · State transition supercomplex PSI-LHCI-LHCII from double phosphatase mutant pph1;pbcp of… · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12154
- Elsewhere: UniProt P12154 · AlphaFold DB P12154
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