MolNFT v1 · #311852 · protein
AlphaFold monomer V2.0 prediction for prunin 1 pru du 6 (Q43607)
Q43607: “AlphaFold monomer V2.0 prediction for prunin 1 pru du 6 (Q43607)”. 6 pockets (best druggability 0.70). MolNFT v1 #311852 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q43607
- Type
- protein
- Length
- 551 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Prunin 1 pru du 6
- UniProt
- Q43607
- Pockets
- 6 · best druggability 0.70
Structure
1 distinct chain · 22% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prunin 1 pru du 6 | protein | 551 | 22% helix, 27% strand | Q43607 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 711 | 0.70 | 0.77 | 54 | empty |
| 2 | 154 | 0.39 | 0.73 | 30 | empty |
| 3 | 60 | 0.39 | 0.80 | 15 | empty |
| 4 | 82 | 0.32 | 0.73 | 16 | empty |
| 5 | 62 | 0.30 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 3FZ3 · Crystal structure of almond PRU1 protein · an experimental structure of the same protein · chain A against B, TM-score 0.71
- 3FZ3 · Crystal Structure of almond Pru1 protein · an experimental structure of the same protein · chain A against B, TM-score 0.71
- 3EHK · Crystal structure of Pru du amandin, an allergenic protein from prunus dulcis · an experimental structure of the same protein · chain A against A, TM-score 0.69
- 3EHK · Crystal structure of pru du amandin, an allergenic protein from prunus dulcis · an experimental structure of the same protein · chain A against A, TM-score 0.69
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q43607
- Elsewhere: UniProt Q43607 · AlphaFold DB Q43607
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