MolNFT v1 · #310696 · protein
AlphaFold monomer V2.0 prediction for proline dehydrogenase (Q72IB8)
Q72IB8: “AlphaFold monomer V2.0 prediction for proline dehydrogenase (Q72IB8)”. 3 pockets (best druggability 0.77). MolNFT v1 #310696 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q72IB8
- Type
- protein
- Length
- 307 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Proline dehydrogenase
- UniProt
- Q72IB8
- Pockets
- 3 · best druggability 0.77
Structure
1 distinct chain · 56% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline dehydrogenase | protein | 307 | 56% helix, 16% strand | Q72IB8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 878 | 0.77 | 0.80 | 72 | empty |
| 2 | 63 | 0.49 | 0.84 | 14 | empty |
| 3 | 118 | 0.37 | 0.73 | 20 | empty |
Compared structures
- 2EKG · Structure of Thermus thermophilus Proline Dehydrogenase inactivated by N-propargylglycine · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 2EKG · Structure of thermus thermophilus proline dehydrogenase inactivated by N-propargylglycine · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 5M42 · Structure of thermus thermophilus L-proline dehydrogenase lacking alpha helices a, B and C · an experimental structure of the same protein · chain A against A, TM-score 0.79
- 5M42 · Structure of Thermus thermophilus L-proline dehydrogenase lacking alpha helices A, B and C · an experimental structure of the same protein · chain A against A, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q72IB8
- Elsewhere: UniProt Q72IB8 · AlphaFold DB Q72IB8
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