MolNFT v1 · #308712 · protein
AlphaFold monomer V2.0 prediction for major prion protein (Q5XVM4)
Q5XVM4: “AlphaFold monomer V2.0 prediction for major prion protein (Q5XVM4)”. 3 pockets (best druggability 0.35). MolNFT v1 #308712 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5XVM4
- Type
- protein
- Length
- 256 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Major prion protein
- UniProt
- Q5XVM4
- Pockets
- 3 · best druggability 0.35
Structure
1 distinct chain · 42% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Major prion protein | protein | 256 | 42% helix, 2% strand | Q5XVM4 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.35 | 0.74 | 19 | empty |
| 2 | 53 | 0.31 | 0.76 | 9 | empty |
| 3 | 50 | 0.27 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XVM4
- Elsewhere: UniProt Q5XVM4 · AlphaFold DB Q5XVM4
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