MolNFT v1 · #307879 · protein

AlphaFold monomer V2.0 prediction for pyrroloquinoline-quinone synthase (P27505)

P27505: “AlphaFold monomer V2.0 prediction for pyrroloquinoline-quinone synthase (P27505)”. 2 pockets (best druggability 0.77). MolNFT v1 #307879 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P27505
Type: protein
Length: 251 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9073C46348542FfE4327c3F363F9B51B22058e75
Molecule: Pyrroloquinoline-quinone synthase
UniProt: P27505
Pockets: 2 · best druggability 0.77

Structure

1 distinct chain · 74% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pyrroloquinoline-quinone synthase	protein	251	74% helix, 2% strand	P27505

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	97	0.77	0.98	26	empty
2	83	0.33	0.74	18	empty

Compared structures

1OTW · Crystal structure of PqqC in complex with PQQ and a putative H2O2 · an experimental structure of the same protein · chain A against A, TM-score 0.99
1OTW · Crystal structure of pqqc in complex with pqq and a putative H2O2 · an experimental structure of the same protein · chain A against A, TM-score 0.99
1OTV · PqqC, Pyrroloquinolinqui Synthase C · an experimental structure of the same protein · chain A against A, TM-score 0.95
1OTV · Pqqc, pyrroloquinolinquinone synthase C · an experimental structure of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P27505
Elsewhere: UniProt P27505 · AlphaFold DB P27505

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