MolNFT v1 · #307646 · protein
AlphaFold monomer V2.0 prediction for 4-phosphopantoate--beta-alanine ligase (Q5JIZ8)
Q5JIZ8: “AlphaFold monomer V2.0 prediction for 4-phosphopantoate--beta-alanine ligase (Q5JIZ8)”. 3 pockets (best druggability 0.69). MolNFT v1 #307646 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5JIZ8
- Type
- protein
- Length
- 261 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDc9c9Af88E0b0A5Ec61DD36Ae0Ecd840271f80cF
- Molecule
- 4-phosphopantoate--beta-alanine ligase
- UniProt
- Q5JIZ8
- Pockets
- 3 · best druggability 0.69
Structure
1 distinct chain · 54% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 4-phosphopantoate--beta-alanine ligase | protein | 261 | 54% helix, 10% strand | Q5JIZ8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 229 | 0.69 | 0.86 | 35 | empty |
| 2 | 64 | 0.42 | 0.81 | 15 | empty |
| 3 | 50 | 0.31 | 0.76 | 18 | empty |
Compared structures
- 3WDM · Crystal structure of 4-phosphopantoate-beta-alanine ligase from Thermococcus kodakarensis · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3WDM · Crystal structure of 4-phosphopantoate-beta-alanine ligase from thermococcus kodakarensis · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3WDL · Crystal structure of 4-phosphopantoate-beta-alanine ligase complexed with ATP · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3WDL · Crystal structure of 4-phosphopantoate-beta-alanine ligase complexed with ATP · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JIZ8
- Elsewhere: UniProt Q5JIZ8 · AlphaFold DB Q5JIZ8
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