MolNFT v1 · #304821 · protein
AlphaFold monomer V2.0 prediction for retrovirus-related pol polyprotein from type-1 retrotransposable element R2 (Q03275)
Q03275: “AlphaFold monomer V2.0 prediction for retrovirus-related pol polyprotein from type-1 retrotransposable…”. 4 pockets (best druggability 0.69). MolNFT v1 #304821 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q03275
- Type
- protein
- Length
- 482 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- Retrovirus-related pol polyprotein from type-1 retrotransposable element R2
- UniProt
- Q03275
- Pockets
- 4 · best druggability 0.69
Structure
1 distinct chain · 50% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Retrovirus-related pol polyprotein from type-1 retrotransposable element R2 | protein | 482 | 50% helix, 13% strand | Q03275 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 428 | 0.69 | 0.80 | 40 | empty |
| 2 | 109 | 0.42 | 0.77 | 17 | empty |
| 3 | 66 | 0.30 | 0.74 | 23 | empty |
| 4 | 52 | 0.24 | 0.72 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03275
- Elsewhere: UniProt Q03275 · AlphaFold DB Q03275
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