MolNFT v1 · #303779 · protein
AlphaFold monomer V2.0 prediction for putative nicotinate phosphoribosyltransferase (Q9HJ28)
Q9HJ28: “AlphaFold monomer V2.0 prediction for putative nicotinate phosphoribosyltransferase (Q9HJ28)”. 4 pockets (best druggability 0.46). MolNFT v1 #303779 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9HJ28
- Type
- protein
- Length
- 392 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBFcDC1D91370Eb31E0B1B0ff22a8664FCf743544
- Molecule
- Putative nicotinate phosphoribosyltransferase
- UniProt
- Q9HJ28
- Pockets
- 4 · best druggability 0.46
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative nicotinate phosphoribosyltransferase | protein | 392 | 39% helix, 21% strand | Q9HJ28 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 183 | 0.46 | 0.75 | 26 | empty |
| 2 | 144 | 0.44 | 0.75 | 28 | empty |
| 3 | 123 | 0.42 | 0.77 | 21 | empty |
| 4 | 53 | 0.29 | 0.75 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1YTD · Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1YTD · Crystal structure of a nicotinate phosphoribosyltransferase from thermoplasma… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1YTE · Crystal structure of a nicotinate phosphoribosyltransferase from thermoplasma… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1YTE · Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1YTK · Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1YTK · Crystal structure of a nicotinate phosphoribosyltransferase from thermoplasma acidophilum… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2I1O · Crystal Structure of a Nicotinate Phosphoribosyltransferase from Thermoplasma acidophilum · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2I1O · Crystal structure of a nicotinate phosphoribosyltransferase from thermoplasma acidophilum · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HJ28
- Elsewhere: UniProt Q9HJ28 · AlphaFold DB Q9HJ28
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