MolNFT v1 · #303357 · protein
AlphaFold monomer V2.0 prediction for protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 (Q5NDF1)
Q5NDF1: “AlphaFold monomer V2.0 prediction for protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2…”. 5 pockets (best druggability 0.71). MolNFT v1 #303357 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5NDF1
- Type
- protein
- Length
- 580 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
- UniProt
- Q5NDF1
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 33% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 | protein | 580 | 33% helix, 26% strand | Q5NDF1 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 617 | 0.71 | 0.79 | 62 | empty |
| 2 | 84 | 0.46 | 0.81 | 17 | empty |
| 3 | 172 | 0.45 | 0.75 | 23 | empty |
| 4 | 80 | 0.33 | 0.74 | 17 | empty |
| 5 | 65 | 0.30 | 0.75 | 17 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NDF1
- Elsewhere: UniProt Q5NDF1 · AlphaFold DB Q5NDF1
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