MolNFT v1 · #303212 · protein
AlphaFold monomer V2.0 prediction for pectinesterase 1 (Q43867)
Q43867: “AlphaFold monomer V2.0 prediction for pectinesterase 1 (Q43867)”. 6 pockets (best druggability 0.77). MolNFT v1 #303212 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q43867
- Type
- protein
- Length
- 586 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Pectinesterase 1
- UniProt
- Q43867
- Pockets
- 6 · best druggability 0.77
Structure
1 distinct chain · 38% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pectinesterase 1 | protein | 586 | 38% helix, 18% strand | Q43867 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1001 | 0.77 | 0.79 | 88 | empty |
| 2 | 453 | 0.70 | 0.81 | 53 | empty |
| 3 | 188 | 0.55 | 0.79 | 23 | empty |
| 4 | 217 | 0.50 | 0.75 | 28 | empty |
| 5 | 91 | 0.38 | 0.76 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q43867
- Elsewhere: UniProt Q43867 · AlphaFold DB Q43867
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