MolNFT v1 · #301439 · protein
AlphaFold monomer V2.0 prediction for procollagen- LYSINE,2-oxoglutarate 5-dioxygenase 1 (O77588)
O77588 · Procollagen-LYSINE,2-oxoglutarate 5-dioxygenase 1: “AlphaFold monomer V2.0 prediction for procollagen- LYSINE,2-oxoglutarate 5-dioxygenase 1 (O77588)”. 6 pockets (best druggability 0.73). MolNFT v1 #301439 on GenesisL1: 3D…
- Accession
- O77588
- Type
- protein
- Length
- 726 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8fB66D2ad2759AdE726c2A8B977129445f1a1D4C
- Molecule
- Procollagen-LYSINE,2-oxoglutarate 5-dioxygenase 1
- UniProt
- O77588
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 30% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Procollagen-LYSINE,2-oxoglutarate 5-dioxygenase 1 | protein | 726 | 30% helix, 25% strand | O77588 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 781 | 0.73 | 0.78 | 77 | empty |
| 2 | 150 | 0.61 | 0.84 | 31 | empty |
| 3 | 170 | 0.60 | 0.83 | 31 | empty |
| 4 | 124 | 0.48 | 0.79 | 24 | empty |
| 5 | 171 | 0.48 | 0.77 | 27 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O77588
- Elsewhere: UniProt O77588 · AlphaFold DB O77588
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