MolNFT v1 · #300759 · protein

AlphaFold monomer V2.0 prediction for type III polyketide synthase B (Q8LDM2)

Q8LDM2: “AlphaFold monomer V2.0 prediction for type III polyketide synthase B (Q8LDM2)”. 5 pockets (best druggability 0.81). MolNFT v1 #300759 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q8LDM2
Type: protein
Length: 392 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xA2DE07e86E532FF47B5d470f3bF914a5B7AafF8c
Molecule: Type III polyketide synthase B
UniProt: Q8LDM2
Pockets: 5 · best druggability 0.81

Structure

1 distinct chain · 43% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Type III polyketide synthase B	protein	392	43% helix, 23% strand	Q8LDM2

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	668	0.81	0.86	74	empty
2	149	0.59	0.84	23	empty
3	114	0.38	0.75	17	empty
4	57	0.28	0.74	15	empty
5	60	0.27	0.72	14	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8LDM2
Elsewhere: UniProt Q8LDM2 · AlphaFold DB Q8LDM2

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