MolNFT v1 · #298671 · protein
AlphaFold monomer V2.0 prediction for deoxyribodipyrimidine photo- lyase (P12769)
P12769 · Deoxyribodipyrimidine photo-lyase: “AlphaFold monomer V2.0 prediction for deoxyribodipyrimidine photo- lyase (P12769)”. 5 pockets (best druggability 0.82). MolNFT v1 #298671 on GenesisL1: 3D structure, binding sites and pockets in…
- Accession
- P12769
- Type
- protein
- Length
- 445 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Deoxyribodipyrimidine photo-lyase
- UniProt
- P12769
- Pockets
- 5 · best druggability 0.82
Structure
1 distinct chain · 51% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Deoxyribodipyrimidine photo-lyase | protein | 445 | 51% helix, 7% strand | P12769 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 527 | 0.82 | 0.88 | 53 | empty |
| 2 | 148 | 0.81 | 0.97 | 29 | empty |
| 3 | 135 | 0.47 | 0.78 | 18 | empty |
| 4 | 79 | 0.34 | 0.75 | 18 | empty |
| 5 | 50 | 0.25 | 0.73 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12769
- Elsewhere: UniProt P12769 · AlphaFold DB P12769
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