MolNFT v1 · #297358 · protein
AlphaFold monomer V2.0 prediction for geranylgeranyl transferase type-2 subunit alpha (Q5NVK5)
Q5NVK5: “AlphaFold monomer V2.0 prediction for geranylgeranyl transferase type-2 subunit alpha (Q5NVK5)”. 8 pockets (best druggability 0.65). MolNFT v1 #297358 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5NVK5
- Type
- protein
- Length
- 567 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0a518D7f85eD490B16cdD47CeC359Ccb050F802E
- Molecule
- Geranylgeranyl transferase type-2 subunit alpha
- UniProt
- Q5NVK5
- Pockets
- 8 · best druggability 0.65
Structure
1 distinct chain · 49% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Geranylgeranyl transferase type-2 subunit alpha | protein | 567 | 49% helix, 13% strand | Q5NVK5 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 305 | 0.65 | 0.81 | 35 | empty |
| 2 | 65 | 0.48 | 0.83 | 14 | empty |
| 3 | 102 | 0.47 | 0.80 | 19 | empty |
| 4 | 88 | 0.46 | 0.80 | 21 | empty |
| 5 | 81 | 0.40 | 0.79 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NVK5
- Elsewhere: UniProt Q5NVK5 · AlphaFold DB Q5NVK5
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