MolNFT v1 · #297167 · protein
AlphaFold monomer V2.0 prediction for cyclic-di-AMP phosphodiesterase pgph (P46344)
P46344: “AlphaFold monomer V2.0 prediction for cyclic-di-AMP phosphodiesterase pgph (P46344)”. 5 pockets (best druggability 0.66). MolNFT v1 #297167 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P46344
- Type
- protein
- Length
- 711 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd568716113838e6C8eA00e11a47103839EFa83d7
- Molecule
- Cyclic-di-AMP phosphodiesterase pgph
- UniProt
- P46344
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 69% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cyclic-di-AMP phosphodiesterase pgph | protein | 711 | 69% helix, 3% strand | P46344 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 511 | 0.66 | 0.77 | 37 | empty |
| 2 | 363 | 0.59 | 0.76 | 33 | empty |
| 3 | 343 | 0.55 | 0.75 | 42 | empty |
| 4 | 105 | 0.39 | 0.76 | 21 | empty |
| 5 | 71 | 0.29 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P46344
- Elsewhere: UniProt P46344 · AlphaFold DB P46344
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