MolNFT v1 · #296999 · protein
AlphaFold monomer V2.0 prediction for polygalacturonase AT1G48100 (Q949Z1)
Q949Z1: “AlphaFold monomer V2.0 prediction for polygalacturonase AT1G48100 (Q949Z1)”. 3 pockets (best druggability 0.78). MolNFT v1 #296999 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q949Z1
- Type
- protein
- Length
- 475 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Polygalacturonase AT1G48100
- UniProt
- Q949Z1
- Pockets
- 3 · best druggability 0.78
Structure
1 distinct chain · 8% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polygalacturonase AT1G48100 | protein | 475 | 8% helix, 40% strand | Q949Z1 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 846 | 0.78 | 0.81 | 81 | empty |
| 2 | 208 | 0.56 | 0.79 | 27 | empty |
| 3 | 113 | 0.39 | 0.75 | 20 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q949Z1
- Elsewhere: UniProt Q949Z1 · AlphaFold DB Q949Z1
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