MolNFT v1 · #296665 · protein
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (Q6D087)
Q6D087: “AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (Q6D087)”. 4 pockets (best druggability 0.46). MolNFT v1 #296665 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q6D087
- Type
- protein
- Length
- 387 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- Phosphoglycerate kinase
- UniProt
- Q6D087
- Pockets
- 4 · best druggability 0.46
Structure
1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 387 | 40% helix, 19% strand | Q6D087 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 112 | 0.46 | 0.79 | 30 | empty |
| 2 | 62 | 0.43 | 0.82 | 15 | empty |
| 3 | 76 | 0.30 | 0.74 | 21 | empty |
| 4 | 52 | 0.29 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6D087
- Elsewhere: UniProt Q6D087 · AlphaFold DB Q6D087
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