MolNFT v1 · #296651 · protein
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (Q5YTQ5)
Q5YTQ5: “AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (Q5YTQ5)”. 3 pockets (best druggability 0.44). MolNFT v1 #296651 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5YTQ5
- Type
- protein
- Length
- 410 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Phosphoglycerate kinase
- UniProt
- Q5YTQ5
- Pockets
- 3 · best druggability 0.44
Structure
1 distinct chain · 42% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 410 | 42% helix, 16% strand | Q5YTQ5 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 178 | 0.44 | 0.74 | 23 | empty |
| 2 | 113 | 0.39 | 0.76 | 32 | empty |
| 3 | 89 | 0.39 | 0.77 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5YTQ5
- Elsewhere: UniProt Q5YTQ5 · AlphaFold DB Q5YTQ5
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