MolNFT v1 · #296277 · protein
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B0VD03)
B0VD03: “AlphaFold monomer V2.0 prediction for phosphoglycerate kinase (B0VD03)”. 3 pockets (best druggability 0.52). MolNFT v1 #296277 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B0VD03
- Type
- protein
- Length
- 395 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Phosphoglycerate kinase
- UniProt
- B0VD03
- Pockets
- 3 · best druggability 0.52
Structure
1 distinct chain · 44% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase | protein | 395 | 44% helix, 18% strand | B0VD03 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 159 | 0.52 | 0.79 | 28 | empty |
| 2 | 83 | 0.46 | 0.81 | 17 | empty |
| 3 | 51 | 0.28 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0VD03
- Elsewhere: UniProt B0VD03 · AlphaFold DB B0VD03
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