MolNFT v1 · #296253 · protein
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase a (P08892)
P08892: “AlphaFold monomer V2.0 prediction for phosphoglycerate kinase a (P08892)”. 5 pockets (best druggability 0.60). MolNFT v1 #296253 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P08892
- Type
- protein
- Length
- 508 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x356701dD1dB7AA99E5e866B5DfA659D570042607
- Molecule
- Phosphoglycerate kinase a
- UniProt
- P08892
- Pockets
- 5 · best druggability 0.60
Structure
1 distinct chain · 46% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase a | protein | 508 | 46% helix, 14% strand | P08892 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.60 | 0.84 | 28 | empty |
| 2 | 82 | 0.42 | 0.79 | 20 | empty |
| 3 | 80 | 0.35 | 0.76 | 17 | empty |
| 4 | 54 | 0.29 | 0.76 | 17 | empty |
| 5 | 61 | 0.28 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08892
- Elsewhere: UniProt P08892 · AlphaFold DB P08892
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