MolNFT v1 · #296217 · protein
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (Q7SIB7)
Q7SIB7: “AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (Q7SIB7)”. 3 pockets (best druggability 0.49). MolNFT v1 #296217 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q7SIB7
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB00e4078924fAA25591B0a231c32CcF455f85C70
- Molecule
- Phosphoglycerate kinase 1
- UniProt
- Q7SIB7
- Pockets
- 3 · best druggability 0.49
Structure
1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase 1 | protein | 417 | 41% helix, 19% strand | Q7SIB7 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 148 | 0.49 | 0.78 | 38 | empty |
| 2 | 199 | 0.46 | 0.75 | 32 | empty |
| 3 | 76 | 0.40 | 0.78 | 16 | empty |
Compared structures
- 1VJC · Structure of pig muscle PGK complexed with MgATP · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1VJC · Structure of pig muscle pgk complexed with mgatp · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1VJD · Structure of pig muscle pgk complexed with ATP · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1VJD · Structure of pig muscle PGK complexed with ATP · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1KF0 · Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 1KF0 · Crystal structure of pig muscle phosphoglycerate kinase ternary complex with AMP-pcp and… · an experimental structure of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7SIB7
- Elsewhere: UniProt Q7SIB7 · AlphaFold DB Q7SIB7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.