MolNFT v1 · #296215 · protein
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (P29408)
P29408: “AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (P29408)”. 3 pockets (best druggability 0.53). MolNFT v1 #296215 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P29408
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Phosphoglycerate kinase 1
- UniProt
- P29408
- Pockets
- 3 · best druggability 0.53
Structure
1 distinct chain · 42% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase 1 | protein | 417 | 42% helix, 19% strand | P29408 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 272 | 0.53 | 0.76 | 43 | empty |
| 2 | 157 | 0.51 | 0.78 | 41 | empty |
| 3 | 77 | 0.37 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29408
- Elsewhere: UniProt P29408 · AlphaFold DB P29408
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