MolNFT v1 · #296210 · protein
AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (P00559)
P00559: “AlphaFold monomer V2.0 prediction for phosphoglycerate kinase 1 (P00559)”. 3 pockets (best druggability 0.48). MolNFT v1 #296210 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P00559
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Phosphoglycerate kinase 1
- UniProt
- P00559
- Pockets
- 3 · best druggability 0.48
Structure
1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoglycerate kinase 1 | protein | 417 | 40% helix, 19% strand | P00559 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 226 | 0.48 | 0.75 | 35 | empty |
| 2 | 141 | 0.48 | 0.78 | 40 | empty |
| 3 | 86 | 0.38 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00559
- Elsewhere: UniProt P00559 · AlphaFold DB P00559
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