MolNFT v1 · #296139 · protein
AlphaFold monomer V2.0 prediction for peptidoglycan-N- acetylglucosamine deacetylase pgda (A0A0H3GDH9)
A0A0H3GDH9 · Peptidoglycan-N-acetylglucosamine deacetylase pgda: “AlphaFold monomer V2.0 prediction for peptidoglycan-N- acetylglucosamine deacetylase pgda (A0A0H3GDH9)”. 2 pockets (best druggability 0.60). MolNFT v1 #296139 on GenesisL1…
- Accession
- A0A0H3GDH9
- Type
- protein
- Length
- 466 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Peptidoglycan-N-acetylglucosamine deacetylase pgda
- Pockets
- 2 · best druggability 0.60
Structure
1 distinct chain · 42% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidoglycan-N-acetylglucosamine deacetylase pgda | protein | 466 | 42% helix, 23% strand | — |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 305 | 0.60 | 0.78 | 30 | empty |
| 2 | 96 | 0.39 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
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