MolNFT v1 · #295097 · protein
AlphaFold monomer V2.0 prediction for peroxisomal targeting signal 1 receptor (Q54MD1)
Q54MD1: “AlphaFold monomer V2.0 prediction for peroxisomal targeting signal 1 receptor (Q54MD1)”. 7 pockets (best druggability 0.74). MolNFT v1 #295097 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q54MD1
- Type
- protein
- Length
- 641 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Peroxisomal targeting signal 1 receptor
- UniProt
- Q54MD1
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 54% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peroxisomal targeting signal 1 receptor | protein | 641 | 54% helix, 1% strand | Q54MD1 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 722 | 0.74 | 0.80 | 77 | empty |
| 2 | 477 | 0.70 | 0.80 | 46 | empty |
| 3 | 360 | 0.64 | 0.79 | 39 | empty |
| 4 | 357 | 0.59 | 0.76 | 28 | empty |
| 5 | 192 | 0.53 | 0.78 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54MD1
- Elsewhere: UniProt Q54MD1 · AlphaFold DB Q54MD1
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