MolNFT v1 · #294195 · protein
AlphaFold monomer V2.0 prediction for peroxidase (P28313)
P28313: “AlphaFold monomer V2.0 prediction for peroxidase (P28313)”. 1 pocket (best druggability 0.79). MolNFT v1 #294195 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P28313
- Type
- protein
- Length
- 364 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97EfFf2d74994e28D3b69b1503Bd9c292B2Df480
- Molecule
- Peroxidase
- UniProt
- P28313
- Pockets
- 1 · best druggability 0.79
Structure
1 distinct chain · 40% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peroxidase | protein | 364 | 40% helix, 7% strand | P28313 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 311 | 0.79 | 0.90 | 39 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 2E3B · Crystal structure of the HA-bound form of Arthromyces ramosus peroxidase at 1.3 Angstroms… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2E3B · Crystal structure of the ha-bound form of arthromyces ramosus peroxidase at 1.3 ångströms… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2E3A · Crystal structure of the no-bound form of arthromyces ramosus peroxidase at 1.3 ångströms… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2E3A · Crystal structure of the NO-bound form of Arthromyces ramosus peroxidase at 1.3 Angstroms… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2E39 · Crystal structure of the cn-bound form of arthromyces ramosus peroxidase at 1.3 ångströms… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2E39 · Crystal structure of the CN-bound form of Arthromyces ramosus peroxidase at 1.3 Angstroms… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 1CK6 · Binding mode of salicylhydroxamic acid to arthromyces ramosus peroxidase · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 1CK6 · Binding mode of salicylhydroxamic acid to arthromyces ramosus peroxidase · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 1C8I · Binding mode of hydroxylamine to arthromyces ramosus peroxidase · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 1C8I · Binding mode of hydroxylamine to arthromyces ramosus peroxidase · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 1ARY · Crystal structures of cyanide-and triiodide-bound forms of arthromyces ramosus peroxidase… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 1ARY · Crystal structures of cyanide-and triiodide-bound forms of arthromyces ramosus peroxidase… · an experimental structure of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28313
- Elsewhere: UniProt P28313 · AlphaFold DB P28313
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