MolNFT v1 · #293921 · protein
AlphaFold monomer V2.0 prediction for xaa-pro dipeptidyl-peptidase (Q59485)
Q59485: “AlphaFold monomer V2.0 prediction for xaa-pro dipeptidyl-peptidase (Q59485)”. 7 pockets (best druggability 0.55). MolNFT v1 #293921 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q59485
- Type
- protein
- Length
- 793 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4E86D2439266DCa1580a1734488545A520deFE4E
- Molecule
- Xaa-pro dipeptidyl-peptidase
- UniProt
- Q59485
- Pockets
- 7 · best druggability 0.55
Structure
1 distinct chain · 29% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xaa-pro dipeptidyl-peptidase | protein | 793 | 29% helix, 26% strand | Q59485 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 214 | 0.55 | 0.78 | 19 | empty |
| 2 | 124 | 0.47 | 0.78 | 18 | empty |
| 3 | 166 | 0.44 | 0.74 | 32 | empty |
| 4 | 53 | 0.36 | 0.79 | 19 | empty |
| 5 | 84 | 0.35 | 0.76 | 22 | empty |
Compared structures
- 6NFF · Structure of X-prolyl dipeptidyl aminopeptidase from Lactobacillus helveticus · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 6NFF · Structure of X-prolyl dipeptidyl aminopeptidase from lactobacillus helveticus · an experimental structure of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q59485
- Elsewhere: UniProt Q59485 · AlphaFold DB Q59485
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