MolNFT v1 · #293325 · protein
AlphaFold monomer V2.0 prediction for pepsin a-5 (P0DJD9)
P0DJD9: “AlphaFold monomer V2.0 prediction for pepsin a-5 (P0DJD9)”. 2 pockets (best druggability 0.61). MolNFT v1 #293325 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0DJD9
- Type
- protein
- Length
- 388 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB74A3a10Bdfe3C1226B2CF28959A9C5F69dc531D
- Molecule
- Pepsin a-5
- UniProt
- P0DJD9
- Pockets
- 2 · best druggability 0.61
Structure
1 distinct chain · 18% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pepsin a-5 | protein | 388 | 18% helix, 38% strand | P0DJD9 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 271 | 0.61 | 0.80 | 39 | empty |
| 2 | 54 | 0.28 | 0.75 | 12 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DJD9
- Elsewhere: UniProt P0DJD9 · AlphaFold DB P0DJD9
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