MolNFT v1 · #293081 · protein

AlphaFold monomer V2.0 prediction for pectin lyase (Q12639)

Q12639: “AlphaFold monomer V2.0 prediction for pectin lyase (Q12639)”. 4 pockets (best druggability 0.79). MolNFT v1 #293081 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q12639
Type: protein
Length: 299 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0CC4140Ba225D530b2DC080d22627144DEBB1186
Molecule: Pectin lyase
UniProt: Q12639
Pockets: 4 · best druggability 0.79

Structure

1 distinct chain · 15% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pectin lyase	protein	299	15% helix, 21% strand	Q12639

Pockets

4 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	158	0.79	0.95	33	empty
2	337	0.68	0.82	51	empty
3	172	0.66	0.86	28	empty
4	577	0.62	0.74	71	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q12639
Elsewhere: UniProt Q12639 · AlphaFold DB Q12639

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