MolNFT v1 · #291062 · protein
AlphaFold monomer V2.0 prediction for pyruvate, phosphate dikinase regulatory protein 1, chloroplastic (O49562)
O49562: “AlphaFold monomer V2.0 prediction for pyruvate, phosphate dikinase regulatory protein 1, chloroplastic…”. 6 pockets (best druggability 0.67). MolNFT v1 #291062 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O49562
- Type
- protein
- Length
- 403 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x17d7D5c62B731f42eBE008979dc6A3E4bdb514C5
- Molecule
- Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic
- UniProt
- O49562
- Pockets
- 6 · best druggability 0.67
Structure
1 distinct chain · 39% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic | protein | 403 | 39% helix, 11% strand | O49562 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 554 | 0.67 | 0.77 | 47 | empty |
| 2 | 244 | 0.49 | 0.74 | 31 | empty |
| 3 | 219 | 0.47 | 0.74 | 18 | empty |
| 4 | 109 | 0.42 | 0.76 | 18 | empty |
| 5 | 54 | 0.29 | 0.75 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O49562
- Elsewhere: UniProt O49562 · AlphaFold DB O49562
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